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Registro Completo |
Biblioteca(s): |
Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
Data corrente: |
24/10/2014 |
Data da última atualização: |
16/11/2022 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
SOMAVILLA, A. L.; SONSTEGARD, T. S.; HIGA, R. H.; ROSA, A. do N.; SIQUEIRA, F.; SILVA, L. O. C. da; TORRES JUNIOR, R. A. de A.; COUTINHO, L. L.; MUDADU, M. de A.; ALENCAR, M. M. de; REGITANO, L. C. de A. |
Afiliação: |
A. L. SOMAVILLA, Programa de Pós-Graduação em Genética e Melhoramento Animal, UNESP/FCAV, Jaboticabal, Brasil; T. S. SONSTEGARD, Bovine Functional Genomics Laboratory, ANRI, USDA-ARS, Beltsville, MD, USA; ROBERTO HIROSHI HIGA, CNPTIA; ANTONIO DO NASCIMENTO ROSA, CNPGC; FABIANE SIQUEIRA, CNPGC; LUIZ OTAVIO CAMPOS DA SILVA, CNPGC; ROBERTO AUGUSTO DE A TORRES JUNIOR, CNPGC; L. L. COUTINHO, Escola Superior de Agricultura Luiz de Queiroz (Esalq), USP, Piracicaba, Brasil; MAURICIO DE ALVARENGA MUDADU, CPPSE; MAURICIO MELLO DE ALENCAR, CPPSE; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE. |
Título: |
A genome-wide scan for selection signatures in Nellore cattle. |
Ano de publicação: |
2014 |
Fonte/Imprenta: |
Animal Genetics, v. 45, n. 6, p. 771-781, dec. 2014 |
DOI: |
10.1111/age.12210 |
Idioma: |
Inglês |
Conteúdo: |
Brazilian Nellore cattle (Bos indicus) have been selected for growth traits for over more than four decades. In recent years, reproductive and meat quality traits have become more important because of increasing consumption, exports and consumer demand. The identification of genome regions altered by artificial selection can potentially permit a better understanding of the biology of specific phenotypes that are useful for the development of tools designed to increase selection efficiency. Therefore, the aims of this study were to detect evidence of recent selection signatures in Nellore cattle using extended haplotype homozygosity methodology and BovineHD marker genotypes (>777 000 single nucleotide polymorphisms) as well as to identify corresponding genes underlying these signals. Thirty-one significant regions (P < 0.0001) of possible recent selection signatures were detected, and 19 of these overlapped quantitative trait loci related to reproductive traits, growth, feed efficiency, meat quality, fatty acid profiles and immunity. In addition, 545 genes were identified in regions harboring selection signatures. Within this group, 58 genes were associated with growth, muscle and adipose tissue metabolism, reproductive traits or the immune system. Using relative extended haplotype homozygosity to analyze high-density single nucleotide polymorphism marker data allowed for the identification of regions potentially under artificial selection pressure in the Nellore genome, which might be used to better understand autozygosity and the effects of selection on the Nellore genome. MenosBrazilian Nellore cattle (Bos indicus) have been selected for growth traits for over more than four decades. In recent years, reproductive and meat quality traits have become more important because of increasing consumption, exports and consumer demand. The identification of genome regions altered by artificial selection can potentially permit a better understanding of the biology of specific phenotypes that are useful for the development of tools designed to increase selection efficiency. Therefore, the aims of this study were to detect evidence of recent selection signatures in Nellore cattle using extended haplotype homozygosity methodology and BovineHD marker genotypes (>777 000 single nucleotide polymorphisms) as well as to identify corresponding genes underlying these signals. Thirty-one significant regions (P < 0.0001) of possible recent selection signatures were detected, and 19 of these overlapped quantitative trait loci related to reproductive traits, growth, feed efficiency, meat quality, fatty acid profiles and immunity. In addition, 545 genes were identified in regions harboring selection signatures. Within this group, 58 genes were associated with growth, muscle and adipose tissue metabolism, reproductive traits or the immune system. Using relative extended haplotype homozygosity to analyze high-density single nucleotide polymorphism marker data allowed for the identification of regions potentially under artificial selection pressure in the Nellore genome, whic... Mostrar Tudo |
Palavras-Chave: |
Desequilíbrio de ligação; Homozigose do haplótipo estendido; Polimorfismo de nucleotídeo único; Relative extended haplotype homozygosity; Single nucleotid; Single nucleotide polymorphisms. |
Thesagro: |
Bos Indicus; Gado de corte. |
Thesaurus Nal: |
Beef cattle; Genotyping; Linkage disequilibrium; Single nucleotide polymorphism. |
Categoria do assunto: |
G Melhoramento Genético S Ciências Biológicas |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/110576/1/PROCI-2014.00083-2.pdf
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Marc: |
LEADER 02827naa a2200397 a 4500 001 1998406 005 2022-11-16 008 2014 bl uuuu u00u1 u #d 024 7 $a10.1111/age.12210$2DOI 100 1 $aSOMAVILLA, A. L. 245 $aA genome-wide scan for selection signatures in Nellore cattle.$h[electronic resource] 260 $c2014 520 $aBrazilian Nellore cattle (Bos indicus) have been selected for growth traits for over more than four decades. In recent years, reproductive and meat quality traits have become more important because of increasing consumption, exports and consumer demand. The identification of genome regions altered by artificial selection can potentially permit a better understanding of the biology of specific phenotypes that are useful for the development of tools designed to increase selection efficiency. Therefore, the aims of this study were to detect evidence of recent selection signatures in Nellore cattle using extended haplotype homozygosity methodology and BovineHD marker genotypes (>777 000 single nucleotide polymorphisms) as well as to identify corresponding genes underlying these signals. Thirty-one significant regions (P < 0.0001) of possible recent selection signatures were detected, and 19 of these overlapped quantitative trait loci related to reproductive traits, growth, feed efficiency, meat quality, fatty acid profiles and immunity. In addition, 545 genes were identified in regions harboring selection signatures. Within this group, 58 genes were associated with growth, muscle and adipose tissue metabolism, reproductive traits or the immune system. Using relative extended haplotype homozygosity to analyze high-density single nucleotide polymorphism marker data allowed for the identification of regions potentially under artificial selection pressure in the Nellore genome, which might be used to better understand autozygosity and the effects of selection on the Nellore genome. 650 $aBeef cattle 650 $aGenotyping 650 $aLinkage disequilibrium 650 $aSingle nucleotide polymorphism 650 $aBos Indicus 650 $aGado de corte 653 $aDesequilíbrio de ligação 653 $aHomozigose do haplótipo estendido 653 $aPolimorfismo de nucleotídeo único 653 $aRelative extended haplotype homozygosity 653 $aSingle nucleotid 653 $aSingle nucleotide polymorphisms 700 1 $aSONSTEGARD, T. S. 700 1 $aHIGA, R. H. 700 1 $aROSA, A. do N. 700 1 $aSIQUEIRA, F. 700 1 $aSILVA, L. O. C. da 700 1 $aTORRES JUNIOR, R. A. de A. 700 1 $aCOUTINHO, L. L. 700 1 $aMUDADU, M. de A. 700 1 $aALENCAR, M. M. de 700 1 $aREGITANO, L. C. de A. 773 $tAnimal Genetics$gv. 45, n. 6, p. 771-781, dec. 2014
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Registro original: |
Embrapa Pecuária Sudeste (CPPSE) |
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Registro Completo
Biblioteca(s): |
Embrapa Pesca e Aquicultura. |
Data corrente: |
15/03/2016 |
Data da última atualização: |
13/11/2017 |
Tipo da produção científica: |
Resumo em Anais de Congresso |
Autoria: |
ALCÂNTARA, G. de L. C. de; KATO, H. C. A.; FREITAS, A. A. de; EVANGELISTA, D. K. R. |
Afiliação: |
GISÉLIA DE LOURDES CARDOSO DE ALCÂNTARA; HELLEN CHRISTINA G DE ALMEIDA, CNPASA; ALEXANDRE AIRES DE FREITAS, CNPASA; DANIELE KLOPPEL ROSA, CNPASA. |
Título: |
Free market handlers training: the answer to the decrease of foodborne diseases for hygienic sanitary lack conditions in fairs of Belém-Pará. |
Ano de publicação: |
2015 |
Fonte/Imprenta: |
In: FENACAM & LACQUA/SARA (WAS)'15.; LATIN AMERICAN & CARIBBEAN AQUACULTURE 15.; SOUTH AMERICAN REGIONAL AQUACULTURE 15.; INTERNATIONAL SHRIMP FARMING SYMPOSIUM, 12.; INTERNATIONAL ACQUACULTURE TRADE SHOW, 12.; INTERNATIONAL AQUACULTURE SYMPOSIUM, 9.; TILAPIA ECONOMIC FORUM, 3., 2015, Fortaleza. Abstracts... Fortaleza: ABCC: World Aquaculture Society, 2015. |
Páginas: |
p. 187. |
Idioma: |
Português |
Palavras-Chave: |
Belém-PA. |
Thesagro: |
Controle de qualidade; Feira; Higiene de alimento; Peixe fresco; Treinamento. |
Categoria do assunto: |
Q Alimentos e Nutrição Humana |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/141153/1/CNPASA-2015-glca.pdf
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Marc: |
LEADER 01029nam a2200217 a 4500 001 2040906 005 2017-11-13 008 2015 bl uuuu u00u1 u #d 100 1 $aALCÂNTARA, G. de L. C. de 245 $aFree market handlers training$bthe answer to the decrease of foodborne diseases for hygienic sanitary lack conditions in fairs of Belém-Pará.$h[electronic resource] 260 $aIn: FENACAM & LACQUA/SARA (WAS)'15.; LATIN AMERICAN & CARIBBEAN AQUACULTURE 15.; SOUTH AMERICAN REGIONAL AQUACULTURE 15.; INTERNATIONAL SHRIMP FARMING SYMPOSIUM, 12.; INTERNATIONAL ACQUACULTURE TRADE SHOW, 12.; INTERNATIONAL AQUACULTURE SYMPOSIUM, 9.; TILAPIA ECONOMIC FORUM, 3., 2015, Fortaleza. Abstracts... Fortaleza: ABCC: World Aquaculture Society$c2015 300 $ap. 187. 650 $aControle de qualidade 650 $aFeira 650 $aHigiene de alimento 650 $aPeixe fresco 650 $aTreinamento 653 $aBelém-PA 700 1 $aKATO, H. C. A. 700 1 $aFREITAS, A. A. de 700 1 $aEVANGELISTA, D. K. R.
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Embrapa Pesca e Aquicultura (CNPASA) |
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